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software:singularity:caviness [2018-08-09 12:49] – [Execute your Singularity container through SLURM] anita | software:singularity:caviness [2021-05-06 18:45] (current) – [Troubleshooting] anita | ||
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< | < | ||
+ | [traine@login01 ~]$ workgroup -g it_css | ||
+ | [(it_css: | ||
+ | salloc: Granted job allocation 844 | ||
+ | salloc: Waiting for resource configuration | ||
+ | salloc: Nodes r00n45 are ready for job | ||
+ | [traine@r00n45 ~]$ vpkg_require singularity | ||
+ | Adding package `singularity/ | ||
+ | [traine@r00n45 ~]$ singularity shell tensorflow.simg | ||
+ | Singularity: | ||
- | [(it_css:traine)@login01 | + | Singularity tensorflow.simg:~> tensorboard --help |
- | | + | usage: tensorboard [-h] [--logdir PATH] [--host ADDR] [--port PORT] |
- | | + | [--purge_orphaned_data BOOL] [--reload_interval SECONDS] |
- | | + | [--db URI] [--inspect] [--tag TAG] [--event_file PATH] |
- | [traine@r00n45 ~]$ vpkg_require singularity | + | [--path_prefix PATH] [--window_title TEXT] |
- | | + | |
- | [traine@r00n45 ~]$ singularity shell tensorflow.simg | + | [--samples_per_plugin SAMPLES_PER_PLUGIN] |
- | | + | |
+ | [--debugger_data_server_grpc_port PORT] | ||
+ | | ||
- | Singularity tensorflow.simg:~> tensorboard | + | TensorBoard is a suite of web applications for inspectinng and understanding |
+ | your TensorFlow runs and graphs. https:// | ||
- | USAGE: /usr/local/bin/ | + | Singularity tensorflow.simg:~> grep Cpus_allowed_list |
+ | Cpus_allowed_list: | ||
+ | Singularity tensorflow.simg: | ||
+ | exit | ||
+ | [traine@r00n45 ~]$ | ||
+ | </ | ||
- | Try --helpfull to get a list of all flags. | + | ==== Troubleshooting ==== |
- | | + | === Locale error === |
- | | + | |
- | Singularity tensorflow.simg: | + | If you experience the error below after starting a particular shell container, then it is likely due to your current locale not being supported in this particular container' |
+ | |||
+ | <code bash> | ||
+ | [traine@r00n45 ~]$ vpkg_require singularity | ||
+ | Adding package `singularity/ | ||
+ | [traine@r00n45 ~]$ singularity shell tensorflow.simg | ||
+ | Singularity: | ||
+ | |||
+ | Singularity tensorflow.simg: | ||
+ | Traceback (most recent call last): | ||
+ | File "/usr/local/bin/ | ||
+ | | ||
+ | File "/ | ||
+ | | ||
+ | File "/ | ||
+ | util.setup_logging() | ||
+ | File "/ | ||
+ | locale.setlocale(locale.LC_ALL, | ||
+ | File "/ | ||
+ | return _setlocale(category, | ||
+ | locale.Error: | ||
+ | </ | ||
+ | |||
+ | Once you start the container shell, check which locale' | ||
+ | |||
+ | <code bash> | ||
+ | Singularity tensorflow.simg: | ||
+ | locale: Cannot set LC_CTYPE to default locale: No such file or directory | ||
+ | locale: Cannot set LC_MESSAGES to default locale: No such file or directory | ||
+ | locale: Cannot set LC_COLLATE to default locale: No such file or directory | ||
+ | C | ||
+ | C.UTF-8 | ||
+ | POSIX | ||
+ | </ | ||
+ | |||
+ | Of course in this particular case, the locale setting for account '' | ||
+ | |||
+ | <code bash> | ||
+ | [traine@r00n45 ~]$ vpkg_require singularity | ||
+ | Adding package `singularity/ | ||
+ | [tainne@r00n45 ~]$ LANG=C.UTF-8 singularity shell tensorflow.simg | ||
+ | Singularity: | ||
+ | |||
+ | Singularity tensorflow.simg: | ||
+ | usage: tensorboard [-h] [--logdir PATH] [--host ADDR] [--port PORT] | ||
+ | | ||
+ | [--db URI] [--inspect] [--tag TAG] [--event_file PATH] | ||
+ | | ||
+ | | ||
+ | | ||
+ | | ||
+ | | ||
+ | | ||
+ | |||
+ | TensorBoard is a suite of web applications for inspectinng and understanding | ||
+ | your TensorFlow runs and graphs. https:// | ||
+ | |||
+ | [[ lots of additional information displayed for optional arguments | ||
+ | |||
+ | Singularity tensorflow.simg: | ||
+ | exit | ||
+ | [traine@r00n45 ~]$ | ||
</ | </ | ||