Show pageOld revisionsBack to top This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong. ===== HPC ===== ==== HPC Basics ==== [[https://hpc-carpentry.github.io/|HPC Carpentry]] teaches basic skills for high-performance computing. HPC Carpentry is a set of teaching materials designed to help new users take advantage of high-performance computing systems. No prior computational experience is required. These lessons are ideal for either traditional or online workshop, or independent (self-paced) study. [[https://hpc-carpentry.github.io/hpc-intro/|Introduction to High-Performance Computing]] is a great place to start (up to lesson 7). The remaining lessons can be referenced for concepts, but are not specific to UD's community clusters. Also consider the [[http://swcarpentry.github.io/shell-novice/|Software Carpentry: The Unix Shell]] workshop to provide additional in depth knowledge for lessons 1-7. ** NOTE: Currently, HPC Carpentry release is a draft. Comments and feedback are welcome.** <note tip>If you would like to schedule an online workshop for your research group based on using the materials from [[https://hpc-carpentry.github.io/|HPC Carpentry]] or [[https://software-carpentry.org/|Software Carpentry]], please [[http://www1.udel.edu/deptforms/it/research_computing/index.html|submit an HPC Request Form]].</note> === Supercomputing in Plain English at Oklahoma University (OU) === Henry Neeman at OU is hosting an annual set of workshops about High Performance Computing called [[http://www.oscer.ou.edu/education.php|Supercomputing in Plain English]]. Learn more about how supercomputers work and how to use them by watching and participating through exercises. All the videos and slides are available [[http://www.oscer.ou.edu/education.php|here]]. ==== Getting started on a UD Cluster ==== Teaches you how to get started using the UD's HPC community clusters specifically focusing on the differences from a standard Linux system. * **Caviness**: [[http://www.udel.edu/it/research/files/cluster/workshop/Caviness-HPC-Basics.pdf|Caviness HPC Basics]] * **Farber**: [[http://www.udel.edu/it/research/files/cluster/workshop/Farber-HPC-Basics.pdf|Farber HPC Basics]] ==== Recommended HPC tutorials and presentations ==== === Tutorials developed at the University of Delaware === * [[http://www.udel.edu/it/research/files/cluster/workshop/vi.pdf|Learning the vi text editor]] (University of Delaware) * [[http://www.udel.edu/it/research/files/cluster/workshop/intro-unix-linux-2.pdf|Introduction to Unix/Linux (Part 2): Variables and Environments, Aliases, Permissions]] (University of Delaware) * [[http://www.udel.edu/it/research/files/cluster/workshop/regex.pdf|Regular Expressions]] (University of Delaware) - [[Additional note]] * [[http://www.hpc.udel.edu/presentations/shell_scripting_pt1|Introduction to Shell Scripting (Part 1)]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/shell_scripting_pt1/shell_scripting_pt1.pdf|PDF]]] * [[http://www.hpc.udel.edu/presentations/shell_scripting_pt2|Introduction to Shell Scripting (Part 2)]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/shell_scripting_pt2/shell_scripting_pt2.pdf|PDF]]] * [[http://www.hpc.udel.edu/presentations/valet|Modular Environment Management with VALET]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/valet/valet.pdf|PDF]]] * [[http://www.hpc.udel.edu/presentations/gridengine_intro|Introduction to Grid Engine]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/gridengine_intro/gridengine_intro.pdf|PDF]]] * [[http://www.hpc.udel.edu/presentations/matlab_batch_mcr/|Matlab: Batch Script and Compiled Array Job]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/matlab_batch_mcr/matlab_batch_mcr.pdf|PDF]]] * [[http://www.udel.edu/it/research/files/cluster/workshop/Introduction_to_Python_Environments.pdf|Python Environments]] (University of Delaware) * [[http://www.udel.edu/it/research/files/cluster/workshop/Python_Part1.pdf|Python Programming (Part 1)]] (University of Delaware) * [[http://www.udel.edu/it/research/files/cluster/workshop/Python_Part2.pdf|Python Programming (Part 2)]] (University of Delaware) * [[http://www.udel.edu/it/research/files/cluster/workshop/python_packages_20115.pdf|Python Packages - matplotlib]] (University of Delaware) - Example files: [[http://www.udel.edu/it/research/files/cluster/workshop/sine_plot.py|sine_plot.py]], [[http://www.udel.edu/it/research/files/cluster/workshop/fit_test1.py|fit_test1.py]], [[http://www.udel.edu/it/research/files/cluster/workshop/fit_test2.py|fit_test2.py]] * [[http://www.hpc.udel.edu/presentations/making_most_of_farber/|Making the Most of Farber: Storage and Standby]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/making_most_of_farber/making_most_of_farber.pdf|PDF]]] * [[http://www.hpc.udel.edu/presentations/mills-spillover/|Mills: Job Scheduling Change (Spillover Queue)]] * [[http://www.udel.edu/it/research/files/cluster/workshop/Compilers.pdf|Compilers: On UD HPC Community Clusters]] (University of Delaware) * [[http://www.udel.edu/it/research/files/cluster/workshop/MATLAB_Compiler.pdf|Matlab Compiler: On UD HPC Community Clusters]] (University of Delaware) * [[http://www.hpc.udel.edu/presentations/software-dev-part1/|Unix Software Development Basics: Project Structure and Build Management with Make]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/software-dev-part1/software-dev-part1.pdf|PDF]]] * [[http://www.hpc.udel.edu/presentations/software-dev-part2/|Unix Software Development Basics: Autotools and Cmake]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/software-dev-part2/software-dev-part2.pdf|PDF]]] * [[http://www.udel.edu/it/research/files/cluster/workshop/Building_and_Installing_Software.pdf|Building and Installing Software: On UD HPC Community Clusters]] (University of Delaware) * [[http://www.udel.edu/it/research/files/cluster/workshop/Revision_Control_and_GIT.pdf|Revision Control and Git]] (University of Delaware) * [[http://www.hpc.udel.edu/presentations/software_management/|Software Management with VALET]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/software_management/software_management.pdf|PDF]]] * [[http://www.hpc.udel.edu/presentations/openfoam-intro/|Using OpenFOAM on the Community Cluster]] (University of Delaware) [as a [[http://www.hpc.udel.edu/presentations/openfoam-intro/openfoam-intro.pdf|PDF]]] === Presentations from the University of Delaware === * [[http://www.udel.edu/it/research/files/cluster/workshop/hpc_JFB_Apr2015.pdf|Coupled Regional Weather Modeling Using UD HPC Resources]] (University of Delaware, Joseph Brodie) * [[http://www.udel.edu/it/research/files/cluster/workshop/hpc_Buxton_Apr2015.pdf|WRF-ARW on Farber]] (University of Delaware, Carly Buxton) * [[http://www.udel.edu/it/research/files/cluster/workshop/hpc_hanson_Apr2015.pdf|History of CESM and getting it to work on Mills]] (University of Delaware, Brian Hanson) === Other HPC tutorials === * [[https://hpc-carpentry.github.io/hpc-intro/|Introduction to High Performance Computing (HPC)]] (HPC Carpentry) * [[http://www.citutor.org/browse.php|Cyber-Infrastructure Tutor (National Center for Supercomputing Applications)]] * [[http://www.osc.edu/supercomputing/training/|Ohio Supercomputing Center workshops]] * [[http://www.sdsc.edu/us/training/elearning/index.php|San Diego Supercomputing Center workshops]] ([[http://www.sdsc.edu/us/training/elearning/login/index.php|request account]]) * [[http://hpcuniversity.org/resources/search/|HPC University workshops]] * [[http://www.it.udel.edu/learnit/online-training-resources|VTC.com (licensed by IT@UD)]] training/hpc/hpc.txt Last modified: 2020-11-17 17:54by anita