# package variables:
id=htseq
version=0.5.3p9
description='Analysing high-throughput sequencing data with Python'
binaries="htseq-count htseq-qa"
url_doc='http://www-huber.embl.de/users/anders/HTSeq/doc/'
dir="HTSeq-$version"
url_get="http://pypi.python.org/packages/source/H/HTSeq/$dir.tar.gz"

# scratch variables:
scratch="/lustre/scratch/$USER/$id"
alias clean="lrm -r $scratch"

# install variables:
compiler='gcc/4.6.2'
require='numpy/1.6.1-2.7'
prefix="${WORKDIR}/sw/$id"
installhome="$prefix/$version"
pythondir="$installhome/lib/python"

# VALET variables.
valetdir="${WORKDIR}/sw/valet"

test -z "$WORKDIR" && echo "WORKDIR not set, start a workgroup shell." && return 1

# setup directories
mkdir -p -m 1777 "$valetdir"
mkdir -p "$installhome/bin" "$pythondir"
mkdir -p "$scratch"
test -d "$scratch/$dir" || curl "$url_get" | tar -zxf - -C "$scratch"